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Sunday, December 13, 2009

Meiosis and Sexual Life Cycles additional



meiosis I and II




Extra: meiosis vs mitosis video

Wednesday, December 9, 2009

Meiosis and Sexual Life Cycles

What is meiosis?

--> cell division that produces reproductive cells in sexually reproducing organisms (the nucleus divides into four hapoloid cells/nuclei)

What are the stages of meiosis?

meiosis I: prophase I, metaphase I, anaphase I, telophase I and cytokinesis (division of the cytoplasm)

meiosis II: prophase II, metaphase II, anaphase II, telophase II and cytokinesis

What are the differences between mitosis and meiosis?

Basically, meiosis reduces the number of chromosome sets from two (diploid) to one (haploid), whereas mitosis conserves the number of chromosome sets. Therefore, meiosis produces cells that differ genetically from their parent cell and from each other, whereas mitosis produces daughter cells that are genetically identical to their parent cell and to each other.

Facts:

- We inherit one set of chromosomes from our mother and one from our father

- In sexual reproduction, a single parent produces genetically identical offspring by mitosis

- Normal human somatic cells have 46 diploid chromosomes.

- The two cell divisions of meiosis produce 4 haploid daughter cells.

- Mutations are the original source for genetic variation.

JK Key terms:

Heredity (inheritance) = transmission of traits from one generation to next

Genetics = the scientific study of heredity

Clone = a group of genetically identical individuals

Gametes = reproductive cells

Somatic cells = any cell other than those involved in gamete formation

Karyotype = display of paired chromosomes (map of chromosomes)

Sex chromosomes = x and y, determine the sex

Autosomes = other chromosomes

Diploid cell= any cell with two chromosome sets (2n)

Haploid cell= any cell with a single chromosome set (n)

Summary:

A cell undergoing meiosis will divide two times; the first division is meiosis 1 and the second is meiosis 2. The phases have the same names as those of mitosis. A number indicates the division number (1st or 2nd):

meiosis 1: prophase 1, metaphase 1, anaphase 1, and telophase 1

meiosis 2: prophase 2, metaphase 2, anaphase 2, and telophase 2

In the first meiotic division, the number of cells is doubled but the number of chromosomes is not. This results in 1/2 as many chromosomes per cell.

The second meiotic division is like mitosis; the number of chromosomes does not get reduced.

The Cell Cycle

What are the results of cell division? + example
--> genetically identical daughter cells
--> example: hydra(budding)

What are the phases of the cell cycle?
--> Mitotic (M) phase usually includes mitosis and cytokinesis
--> interphase (G1 - first gap, S - synthesis, G2 - second gap)

Mitosis is usually broken down to 5 stages:
prophase, prometaphase, metaphase, anaphase, telophase

What is a checkpoint of the cell cycle?
It is a control point where stop and go-ahead signals can regulate the cycle.

Facts:
- Cells duplicate their genetic material before they divide.
- DNA is partitioned among chromosomes.
- Eukaryotic cell division consists of mitosis and cytokinesis.
- Animal cells carry out cytokinesis by cleavage, and plant cells from a cell plate.
- Cancer cells elude normal regulation and divide out of control, forming tumors.

Key terms:
genome = genetic information
chromosome = package of DNA
somatic cells = all body cells except the reproductive cells
gametes = reproductive cells
chromatin = a complex of DNA
sister chromatids = two chromatids containing the same DNA molecule
centromere = a region where 2 sister chromatids are attached
meiosis = cell division
cytokinesis = division of the cytoplasm
MPF = maturation-promoting factor, a protein complex required for a cell to progress from late interphase to mitosis (cyclin and a protein kinase when active)
growth factor = a protein released by certain cells that stimulates other cells to divide



mitosis phases

Summary:

We have already discussed how the two main events of cellular reproduction are the copying of cellular components and the cleavage of the cell. These two events, copying and cleaving, represent the two larger phases of the cell cycle, interphase and Mitosis. Mitosis is the part of the cell cycle when the cell prepares for and completes cell division. During interphase, appropriate cellular components are copied. Interphase is also a time of checkpoints to make sure that the cell is ready to proceed into mitosis. Both of these two phases have further sub-divisions. Since the cell cycle is a "cycle" it has no distinct beginning or ending. Cells are continually entering and exiting the various phases of the cycle.

Cell Communication


cell junctions
[both animals and plants have cell junctions that allow muscles to pass readily between adjacent cells without crossing plasma membrane]

Explain the evolution of cell signaling!
Signaling in microbes has much in common with processes in multicellular mechanisms, suggesting an early origin of signaling mechanisms. Bacterial cells can sense the local density of bacterial cells by binding molecules secreted by other cells. In some cases, such signals lead to aggregation of these cells into biofilms.

What are three stages of cell signaling?
1. reception
2. transduction
3. response

What is apoptosis?
Apoptosis is a type of programmed cell death in which cell components are disposed of in an orderly fashion, without damage to neighboring cells.

Facts:
- In local signaling, animal cells may communicate by direct contact or by secreting local regulators, such as growth factors or neurotransmitters.

- The binding between signaling (ligand) and receptor is highly specific.

- Intracellular receptors are cytoplasmic or nuclear proteins.

- The behavior of testosterone is representative of steroid hormones.

- Most water-soluble molecules bind to specific sites on receptor proteins embedded in the cell’s plasma membrane.

Key terms:

Signal transduction pathway = series of steps when a signal on a cell’s surface is converted to a specific cellular response

Local regulators = influence cells in the vicinity

Hormones = chemicals for long-distance signaling

Ligand = a molecule that binds specifically to another molecule, usually a larger one

Cyclic AMP/ cAMP = cyclic adenosine monophosphate, a ring-shaped molecule made from ATP that is common intracellular signaling molecule (second messenger)

Receptor tyrosine kinase proteins = inactive monomers

Protein kinase = an enzyme that transfers phosphate groups from ATP to a protein

Adenylyl cyclase = an enzyme embedded in the plasma membrane; converts ATP to camp in response to extracellular signals

Scaffolding proteins = large relay proteins to which several other relay proteins are simultaneously attached

Apoptosis = a program of controlled cell suicide

Summary:

Signaling in microbes has much in common with processes in multicellular organisms, with processes in multicellular organisms, suggesting an early origin of signaling mechanisms. In local signaling, animal cells may communicate by direct contact or by secreting local regulators, such as growth factors or neurotransmitters. For signaling over long distances, both animals and plants use hormones. Earl Sutherland discovered how the hormone epinephrine acts on cells: the signal is transmitted by successive shape changes in the receptor and relay molecules.

The binding between a ligand and receptor is highly specific. The change of the receptor is often the initial transduction of the signal. A G protein-coupled receptor is a membrane receptor that works with the help of a cytoplasmic G protein. Ligand binding activates the receptor, which then activates a specific G protein, which activates another, propagating the signal along a signal transduction pathway. Another receptor in the plasma membrane is tryosine kinase. Specific signaling molecules cause ligand-gated ion channels in a membrane to open or close, regulating the flow of specific ions. Intracellular receptors are cytoplasmic or nuclear proteins.

Cascades of molecular interactions relay signals from receptors to target molecules in the cell.

Cell signaling leads to regulation of transcription or cytoplasmic activities.

Apoptosis is a type of programmed cell death in which cell components are disposed of in an orderly fashion, without damage to neighboring cells.

(video!)

Photosynthesis


What is photosynthesis? Give the equation!

Photosynthesis is a a process that converts carbon dioxide into organic compounds, especially sugars, using the energy from sunlight.

photosynthesis equation

What is an autotroph?

Autotrophs are "self-feeders".

How does Ps relate to fall leaf colors?

Plants change their leaves color in the fall. Most leaves include the chlorophyll (green), xathophyll (yellow) and carotene (orange) pigments, but chlorophyll is much than the others. It covers other two. During fall, the strength of light is weaker and the temperature drops, too. Plants/leaves adopt to it by breaking down chlorophyll. N and Mg (building chlorophyll) are salvaged and moved into the stem for next year. Now other, accessory pigments are reflected the most and give leaves diverse “fall” colors.

Facts:

- Photosynthesis converts light energy to chemical energy of food!

- The light reactions convert solar energyto the chemical energy of ATP and NADPH.

- The Calvin Cycle uses ATP and NADPH to convert carbon dioxide to sugar.

- Alternative mechanisms of carbon fixation have evolved in hot, arid climates.

- All green parts of plants have chloroplasts.

Key terms:

Autotrophs – self feeders

Heterotrophs – obtain their organic material by the second major mode of nutrition, unable to make their own food

Chlorophyll – the green pigment within chloroplasts

Mesophyll – the tissue in the interior of the leaf

Stroma – the dense fluid within the chloroplasts

Thylakoids – interconnected membranous sacs

Grana – thylakoid coumn

Photophosphorylation – adition of a phosphate group to ADP

Carbon fixation – initial incorporation of carbon into organic compounds

Wavelength – the distance between the crest of electromagnetic waves

Summary:

Photosynthesis is a process in which light energy is converted to chemical energy and used to produce organic compounds. In plants, photosynthesis occurs within the chloroplasts. Photosynthesis consists of2 stages, the light and the dark reactions. The light reactions convert light into energy (ATP, NADPH) and the dark reactions use energy and carbon dioxide to produce sugar.

Extra: light dependant reaction of photosynthesis video!

Cellular Respiration [Harvesting Chemical Energy]

What is cellular respiration and its equation?

It is the process of releasing energy from food.

Equation: C6H12O6 + 6O2 --> 6CO2 + 6 H2O

(The energy is released from the bonds)

Name the 3 main stages of cell respiration and explain briefly

1) glycolysis

purpose: To split glucose and produce NADH and ATP

location: Cytoplasm (cytosol)

requirements: glucose, 2 ATP, 4 ADP, 2NAD+

products (net results): 2 pyruvic acids (3C acid), 2 ADP, 4 ATP, 2 NADH

a) Energy investment phase --> G3P (glycerolaldahyde, 3C sugar)

b) Energy harvest (payoff) phase --> pyruvate

krebs cycle (citric acid cycle)

--> doesn't require O2

purpose: oxidizing pyruvic acid to CO2, production of NADH and FADH2 (form of cell energy)

location: mitochondria matrix

requirements: pyruvic acid (3C acid), coenzyme A, 4 NAD+, 1 ADP, 1 FAD (all double for each glucose)

products: 3 CO2, acetyl CoA, 4 NADH, 1 ATP, 1 FADH2

acetyl CoA --> acetyl coenzime A; the entry compound for the krebs cycle in celll respiration, formed from a fragment pyruvate attached to a coenzime


oxidative phosphorylation (electron transport chain)

purpose: converting NADH and FADH2 into ATP

location: mitochondria cristae

ETC --> mitochondrial inner membrane (control of the energy transport)

requirements: NADH or FADH2, ADP, O2

products: NAD+ and FAD, ATP, H2O (36-38 ATP --> total/ net result)

What is ATP synthase?

ATP synthase is a general term for an enzyme that can synthesize adenosine triphosphate (ATP) from adenosine diphosphate (ADP) and inorganic phosphate by using some form of energy. This energy is often in the form of protons moving down an electrochemical gradient, such as from the lumen into the stroma of chloroplasts or from the inter-membrane space into the matrix inmitochondria. The overall reaction sequence is:

ADP + Pi → ATP

5 facts:

- The energy stored in the organic molecules of food ultimately comes from the sun.

- To keep working, a cell must regenerate ATP.

- The electron transport chain is a collection of molecules embedded in the inner membrane of the mitochondria in eukaryotic cells.

- In prokaryotic cells, the krebs cycle occurs in the cytosol.

- At the end of electron transport chain, electrons are passed to oxygen, reducing it to water.

Key terms:

Aerobic respiration – the most relevant and efficient catabolic pathway

Anaerobic – no O2

Cellular respiration – both aerobic and anaerobic processes

Oxidation – loss of electrons and energy

Oxidizing agent – the electron acceptor

Reduction – gain of electrons and energy

Reducing agent – the electron donor

NAD+ - electron carrier/acceptor, oxidizing agent in glycolisis

Chemiosmosis – energy-coupling mechanism

Fermentation – a way of harvesting chemical energy without using either oxygen or any ETC (no cell respiration)

Summary:

Cellular respiration allows organisms to use (release) energy stored in thechemical bonds of glucose. The energy in glucose is used to produce ATP. Cells use ATP to supply their energy needs. Cellular respiration is therefore a process in which the energy in glucose is transformed to ATP.

In respiration, glucose is oxidized and thus releases energy. Oxygen is reduced to form water. The carbon atoms of the sugar molecule are released as carbon dioxide.

The complete breakdown of glucose to carbon dioxide and water requires three major steps:

1)glycolysis; 2) krebs cycle; 3) oxidative phosphorylation

Glycolysis produces two ATP. Thirty-four more ATP are produced by aerobic pathways if oxygen is present.

Extra: Glucose Breakdown: RAP!